Disabling click tracking for deeplinks

Hi all! I need to send some emails with deeplinks to users and am planning to implement the workaround of disabling click tracking for those links specifically so the deeplinks actually open the app (we haven't have a chance to set up custom sub-link paths). Does anyone know if disabling click tracking through Sparkpost could have an impact on domain or IP reputation? E.g. if clicks aren't getting tracked via Sparkpost would that be a flag to Google Postmaster or do they have their own metrics to analyze that?